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SRX155791: Capsaspora owczarzaki ATCC 30864 RNA Sequencing
2 ILLUMINA (Illumina HiSeq 2000) runs: 22.8M spots, 3.5G bases, 1.6Gb downloads

UUID: 521de95e-c576-4029-8533-7761f6d614ec
Design: RNA was converted into cDNA libraries and sequenced on Illumina
Submitted by: Broad Institute (BI)
Study: An amoeboid symbiont of a pulmonate snail
show Abstracthide Abstract
<b><i>Capsaspora owczarzaki</i></b> is being sequenced as part of the "Origins of Multicellularity" sequencing project conducted at the Broad Institute. To date, 625 contigs have been assembled into 84 scaffolds with annotation. Knowledge of the Capsaspora genome sequence would provide insights into host-parasite coevolution in the <i>Capsaspora-Schistosoma</i> system, but more importantly, it might also be used to develop strategies in the control of Schistosomiasis, a devastating human disease.
Sample: Generic sample from Capsaspora owczarzaki ATCC 30864
SAMN01057521 • SRS346855 • All experiments • All runs
Library:
Name: Solexa-80912
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
forward77  reverse

Experiment attributes: (show all 7 attributes...) (hide...)
gssr_id: 135223.0
lsid: broadinstitute.org:bsp.prod.sample:2C223
material_type: RNA:Total RNA
project: D1060
root_sample_id: SM-26RFO
sample_id: SM-2C223
work_request: 28606
Pipeline: show...hide...
NameStepProgramVersionNotes
base caller2012-02-11 15:29:56.0GAPipelineRTA1.12.4.2Sequencer Application 1.4.8
Runs: 2 runs, 22.8M spots, 3.5G bases, 1.6Gb
Run# of Spots# of BasesSizePublished
SRR51546511,386,3391.7G798.6Mb2012-06-24
SRR51546811,385,7991.7G789Mb2012-06-24

ID:
197051

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