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SRX7823791: Association mapping for phosphorus uptake and utilization efficiency traits in mungbean
1 ILLUMINA (Illumina HiSeq 4000) run: 4.1M spots, 1.2G bases, 531Mb downloads

Design: Association mapping for phosphorus uptake and utilization efficiency traits in mungbean
Submitted by: IARI
Study: Association mapping for phosphorus uptake and utilization efficiency traits in mungbean
show Abstracthide Abstract
Phosphorus deficiency mainly affects the growth and development of plants in mungbean. To address this issue, 144 diverse mungbean genotypes were evaluated for phosphorus uptake and utilization efficiency traits under hydroponics. further, genome wide association study was conducted with 55,634 SNPs obtained by NGS based genotyping by sequencing approach. After performing BLAST search analysis against Arabidopsis genome databae, we identified three potential candidate genes VRADI11G08340, VRADI01G05520 and VRADI04G10750 with missense SNPs in coding sequence region, which showed significant variation in protein structure at tertiary level
Sample: KM 2241
SAMN14252995 • SRS6235221 • All experiments • All runs
Organism: Vigna radiata
Library:
Name: KM 2241
Instrument: Illumina HiSeq 4000
Strategy: WGS
Source: GENOMIC
Selection: size fractionation
Layout: PAIRED
Runs: 1 run, 4.1M spots, 1.2G bases, 531Mb
Run# of Spots# of BasesSizePublished
SRR112108454,096,2031.2G531Mb2020-02-29

ID:
10237036

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