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SRX8218150: UCE sequencing of Tupaia montana
1 ILLUMINA (Illumina HiSeq 2000) run: 3M spots, 815M bases, 341Mb downloads

Design: Libraries prepared with Kapa LTP kits; UCE enrichment performed with Roche Nimblegen probes
Submitted by: Smithsonian Conservation Biology Institute
Study: Ultraconserved element sequencing of mountain treeshrews from Kinabalu National Park, Sabah, Borneo
show Abstracthide Abstract
In this study, we used target enrichment methods to sequence ultraconserved element loci from 80 mountain treeshrews (Tupaia montana) sampled across their elevational range on two mountain peaks in Kinabalu National Park (KNP), Sabah, Borneo. Our study objectives were to use a population genomics approach to determine the population genetic structure and genetic diversity of mountain treeshrews in KNP, to test the hypothesis that the broad elevational gradient they inhabit has resulted in limited gene flow across the landscape. These data serve as a foundation from which to track the effects of global climate change in this species over time.
Sample:
SAMN14774415 • SRS6576200 • All experiments • All runs
Organism: Tupaia montana
Library:
Name: BOR542_2350_Tam
Instrument: Illumina HiSeq 2000
Strategy: Targeted-Capture
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 3M spots, 815M bases, 341Mb
Run# of Spots# of BasesSizePublished
SRR116571302,952,755815M341Mb2020-11-27

ID:
10707752

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