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SRX8634376: 16S rRNA of BAL samples
1 OXFORD_NANOPORE (GridION) run: 94,384 spots, 139.4M bases, 121.5Mb downloads

Design: 16S rRNA amplicon sequencing of BAL samples. High accuracy basecalling on GridION Mk15
Submitted by: University of Cambridge
Study: Secondary pneumonia in critically ill ventilated patients with COVID-19
PRJNA642012 • SRP269256 • All experiments • All runs
show Abstracthide Abstract
We studied the microbial composition and diagnostic microbiology results of bronchoalveolar lavage (BAL) samples taken from adult COVID-19 patients and non-COVID-19 patients receiving artificial ventilation in a teaching hospital ICU. We observed that although COVID-19 patients had a greater incidence of VAP, the causative pathogens were similar in both groups.
Sample:
SAMN15391224 • SRS6920937 • All experiments • All runs
Organism: human lung metagenome
Library:
Name: sample15
Instrument: GridION
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: SINGLE
Runs: 1 run, 94,384 spots, 139.4M bases, 121.5Mb
Run# of Spots# of BasesSizePublished
SRR1211041294,384139.4M121.5Mb2020-06-29

ID:
11222472

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