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ERX181060: Whole Genome Sequencing of Leishmania donovani donovani
1 ILLUMINA (Illumina HiSeq 2000) run: 11.3M spots, 2.3G bases, 1.3Gb downloads

Design: Illumina sequencing of library 3909850, constructed from sample accession ERS067673 for study accession ERP000140. This is part of an Illumina multiplexed sequencing run (7064_7). This submission includes reads tagged with the sequence GGCTACAG.
Submitted by: The Wellcome Trust Sanger Institute (SC)
Study: Genomic diversity in Leishmania donovani in Indian subcontinent.
show Abstracthide Abstract
Gemini project aims to characterize the populations of Leishmania donovani in Nepal and India that are causing clinical polymorphism despite apparent genomic homogeneity. To understand this diverse severity we characterize the diversity in these pathogen populations on 2 levels; genomics and metabolomics level. We will integrate the genomics and metabolomics data and finally link it back to the clinical polymorphism. The better we understand clinical polymorphism, the better the clinical management, we can use the integrated gemini data to design better tools and thus globally boost disease control.
Sample:
SAMEA1560633 • ERS067673 • All experiments • All runs
Library:
Name: 3909850
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Custom
Runs: 1 run, 11.3M spots, 2.3G bases, 1.3Gb
Run# of Spots# of BasesSizePublished
ERR20637511,292,2592.3G1.3Gb2013-07-05

ID:
284873

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