GSM5556915: HCCN41T; Homo sapiens; RNA-Seq - SRA

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SRX12008835: GSM5556915: HCCN41T; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 20M spots, 3G bases, 912.9Mb downloads

Submitted by: NCBI (GEO)

Study: Human hepatocellular carcinoma RNAseq data

PRJNA760521 • SRP335582 • All experiments • All runs

show Abstracthide Abstract

This is a series of RNAseq data obtained from the predominant region of 29 treatment-naïve, surgically-resected human HCCs. Overall design: mRNA was purified from fresh frozen human hepatocellular carcinoma tissue and RNAseq was performed.

Sample: HCCN41T

SAMN21216408 • SRS10014973 • All experiments • All runs

Organism: Homo sapiens

Library:

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: Total RNA was extracted from fresh frozen tumor tissues using AllPrep DNA/RNA/Protein Kit (Qiagen). RNA library was prepared using NEBNext Poly(A) mRNA Magnetic Isolation Module (New England Biolabs, Ipswich, MA) and NEBNext Ultra Directional RNA Library Prep Kit for Illumina (New England Biolabs).

Experiment attributes:

GEO Accession: GSM5556915

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 20M spots, 3G bases, 912.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR15713249	19,969,420	3G	912.9Mb	2021-09-26

ID:: 15927725

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Sequence Read Archive

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