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SRX12488181: Whole genome Illumina MiSeq sequence of Shigella sonnei
1 ILLUMINA (Illumina MiSeq) run: 783,207 spots, 370.5M bases, 193.7Mb downloads

External Id: EXT00420001
Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN22060988 • SRS10451405 • All experiments • All runs
Organism: Shigella sonnei
Library:
Name: DNA Prep library SEQ000114297
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward251  reverse

Runs: 1 run, 783,207 spots, 370.5M bases, 193.7Mb
Run# of Spots# of BasesSizePublished
SRR16203827783,207370.5M193.7Mb2021-10-05

ID:
16930750

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