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SRX12842348: Pro4QV85mix
1 PACBIO_SMRT (PacBio RS II) run: 3,821 spots, 38M bases, 26.9Mb downloads

Design: A mixture of 4 HIV provirus SGA DNA has been sequenced separately on four flowcells using the P4/C2 chemistry (180-min movies) and reads with QV <85 covering HXB2 801-8800 have been selected.
Submitted by: Frederick National Laboratory for Cancer Research
Study: QuasiSeq: Profiling Viral Quasispecies via Self-tuning Spectral Clustering with PacBio Long Reads
PRJNA771375 • SRP341421 • All experiments • All runs
show Abstracthide Abstract
These datasets were test data used to develop and improve the QuasiSeq, a workflow to identify the quasispecies in viral samples
Sample: Pro4QV85mix
SAMN22787415 • SRS10786292 • All experiments • All runs
Organism: Human immunodeficiency virus 1
Library:
Name: Pro4QV85
Instrument: PacBio RS II
Strategy: AMPLICON
Source: GENOMIC
Selection: size fractionation
Layout: SINGLE
Runs: 1 run, 3,821 spots, 38M bases, 26.9Mb
Run# of Spots# of BasesSizePublished
SRR166416023,82138M26.9Mb2021-10-30

ID:
17504473

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