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DRX238733: NextSeq 550 sequencing of SAMD00249875
1 ILLUMINA (NextSeq 550) run: 17.4M spots, 1.5G bases, 548.5Mb downloads

Submitted by: KUMAMOTO
Study: RNA sequence of LPS, 3MC and UV-treated mouse and naked mole rat skins
show Abstracthide Abstract
We demonstrated that naked mole rats (NMRs) show marked resistance to two types of chemical carcinogenesis. By carcinogenic 3MC- or UV-treatment, both NMR and mouse skin tissues increased DNA-damage and cell death. However, only NMR skin tissues showed markedly dampened inflammatory response, in contrast to mouse skin tissues with marked activation of inflammation. On the other hand, in response to bacterial virulence factors, NMR immune cells can accumulate in tissues as well as mouse immune cells. To gain mechanistic insight, we performed RNA-seq of 3MC-, UV-, LPS-treated NMR and mice skin tissues.
Sample: NMR_skin_control_1
SAMD00249875 • DRS209779 • All experiments • All runs
Library:
Instrument: NextSeq 550
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: TruSeq stranded mRNA library preparation kit (Illumina)
Spot descriptor:
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Runs: 1 run, 17.4M spots, 1.5G bases, 548.5Mb
Run# of Spots# of BasesSizePublished
DRR24895117,419,6621.5G548.5Mb2021-11-21

ID:
17979587

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