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ERX4838714: Illumina HiSeq 1000 sequencing
1 ILLUMINA (Illumina HiSeq 1000) run: 4.6M spots, 232.3M bases, 159.3Mb downloads

Design: RiboMethSeq rRNA
Submitted by: Lorraine University
Study: Systematic mapping of rRNA 2'-O methylation during frog development and involvement of the methyltransferase Fibrillarin in eye and craniofacial development in Xenopus laevis
show Abstracthide Abstract
Using RiboMethSeq, we systematically reinvestigate X. laevis ribosomal RNA 2'-O methylation, confirming all previously 89 mapped sites and identifying 14 novel putative positions on 18S and 28S rRNA. 23 positions are validated orthogonally by low dNTP primer extension, including 10 of the new positions.
Sample: RMS_Xenope_Stade32_6
SAMEA7753292 • ERS5500630 • All experiments • All runs
Organism: Xenopus laevis
Library:
Name: DL20
Instrument: Illumina HiSeq 1000
Strategy: ncRNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: SINGLE
Construction protocol: Small RNA Seq NEB
Runs: 1 run, 4.6M spots, 232.3M bases, 159.3Mb
Run# of Spots# of BasesSizePublished
ERR50323644,555,475232.3M159.3Mb2022-01-13

ID:
19146455

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