Brain transcriptome of Conger conger - SRA

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SRX14005025: Brain transcriptome of Conger conger
1 ILLUMINA (Illumina NovaSeq 6000) run: 40.5M spots, 12.1G bases, 3.8Gb downloads

Design: RNAseq was performed at the GeT-PlaGe core facility, INRA Toulouse. RNA-seq libraries have been prepared according to Illumina's protocols using the Illumina TruSeq Stranded mRNA sample prep kit to analyze mRNA. Briefly, mRNA were selected using poly-T beads. Then, RNA were fragmented to generate double stranded cDNA and adaptators were ligated to be sequenced. 11 cycles of PCR were applied to amplify libraries. Library quality was assessed using a Fragment Analyser and libraries were quantified by QPCR using the Kapa Library Quantification Kit. The library was sequenced on an Illumina NovaSeq platform to generate 30 million 2 x 150 bp read pairs.

Submitted by: INRAE (Fish Physiology and Genomics laboratory)

Study: Conger conger isolate:Concon-B Genome sequencing

PRJNA702045 • SRP308068 • All experiments • All runs

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A chromosome-scale genome assembly of the European conger, Conger conger.

Sample: Brain

SAMN25279404 • SRS11843194 • All experiments • All runs

Organism: Conger conger

Library:

Name: Conger_conger_brain

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 40.5M spots, 12.1G bases, 3.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR17844033	40,475,381	12.1G	3.8Gb	2022-04-04

ID:: 19701133

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