U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX14428444: GSM5945021: Sp_blastula_wt_1_RNAseq; Strongylocentrotus purpuratus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 25.7M spots, 5.2G bases, 2.2Gb downloads

External Id: GSM5945021_r1
Submitted by: Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn
Study: An ancestral Wnt-Brachyury feedback loop and vertebrate-specific recruitment of mesoderm-determining target genes revealed by comparative Brachyury target screens
PRJNA756953 • SRP333687 • All experiments • All runs
show Abstracthide Abstract
Transcription factor brachyury plays a key role during mesoderm development in vertebrates. In this study we study study the effect of this transcription factor in diploblastic cnidarian model organism N. vectensis Overall design: Brachyury binding sites were identified with ChIP-seq and effect of brachyury binding on gene expression was studied with RNA-seq
Sample: Sp_blastula_wt_1_RNAseq
SAMN26564826 • SRS12242491 • All experiments • All runs
Organism: Strongylocentrotus purpuratus
Library:
Name: GSM5945021
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: 3 biological replicates of translational morpholino and control were generated. Libraries were multiplexed and sequenced on Illumina HiSeq 2500 to generate 100bp PE reads.
Runs: 1 run, 25.7M spots, 5.2G bases, 2.2Gb
Run# of Spots# of BasesSizePublished
SRR1829074525,715,7175.2G2.2Gb2022-08-01

ID:
20517192

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...