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DRX378385: Illumina HiSeq 2500 sequencing of SAMD00511295
1 ILLUMINA (Illumina HiSeq 2500) run: 38.7M spots, 1.9G bases, 965.1Mb downloads

Submitted by: KUMAMOTO
Study: Elucidation of transcription factor function of medaka PPARa using ChIP-seq
show Abstracthide Abstract
Medaka (Oryzias latipes) is a teleost fish with an XX/XY sex determination system, similar to that of mammals. However, under high temperature conditions, XX medaka is masculinized by elevation of cortisol, the major teleost glucocorticoid. Previously, the RNA-seq analysis showed that expression of peroxisome proliferator-activated receptor alpha (PPARa) signalling genes was increased by cortisol. In this study, to identify PPARa target genes during sexual differentiation, we performed ChIP-seq analysis using medaka larvae.
Sample: Oryzias latipes FLFII-DMSO for ChIp seq using PPARa antibody
SAMD00511295 • DRS245963 • All experiments • All runs
Organism: Oryzias latipes
Library:
Instrument: Illumina HiSeq 2500
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Construction protocol:
Spot descriptor:
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Runs: 1 run, 38.7M spots, 1.9G bases, 965.1Mb
Run# of Spots# of BasesSizePublished
DRR39256538,732,9351.9G965.1Mb2022-07-14

ID:
22945674

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