U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

DRX381073: MinION sequencing of SAMD00515006
1 OXFORD_NANOPORE (MinION) run: 523,327 spots, 1.9G bases, 1.5Gb downloads

Submitted by: Genome Information Research Center of RIMD in Osaka University (GIRC)
Study: Comprehensive identification of non-tuberculous mycobacteria and prediction of macrolide resistance
PRJDB12894 • DRP008093 • All experiments • All runs
show Abstracthide Abstract
The bottleneck in the duration required for the identification of non-tuberculous mycobacteria is the bacterial cultivation from sputum samples and it takes up to 8 weeks using the solid medium. In this study, we developed a method using MGIT cultures and achieved to identify bacterial species and predict macrolide resistance in 2 weeks at most.
Sample: CW28340
SAMD00515006 • DRS246452 • All experiments • All runs
Organism: Mycolicibacterium peregrinum
Library:
Name: CW28340
Instrument: MinION
Strategy: WGS
Source: METAGENOMIC
Selection: MDA
Layout: SINGLE
Construction protocol: "Glass beads shaking, Rapid PCR Barcoding Kit (SQK-RPB056)"
Spot descriptor:
1  forward

Runs: 1 run, 523,327 spots, 1.9G bases, 1.5Gb
Run# of Spots# of BasesSizePublished
DRR395294523,3271.9G1.5Gb2022-07-21

ID:
23097613

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...