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SRX17555545: skin microbiome of Rhinella marina
1 ILLUMINA (Illumina MiSeq) run: 56,727 spots, 33.3M bases, 18.7Mb downloads

Design: Norgens Microbiome DNA Isolation Kit for DNA extraction, 515F/806R EMP primers to amplify V4 region of 16S rRNA gene
Submitted by: Charles Darwin University
Study: Wild and common garden cane toad skin microbiomes
show Abstracthide Abstract
Cane toads (Rhinella marina) have evolved changes in their behavior, morphology, and physiology in their <100-year invasion across northern Australia. In this study, we assess whether divergence of skin bacterial microbiomes on toads from sites across northern Australia are affected by host genotype or habitat. We used skin swab samples from wild toads from four sites to quantify the amount of divergence of bacterial communities. We then used a common garden experiment to detect whether those changes among sites' communities are found in offspring when raised at a single location. The MiSeq sequences are from skin swab samples of wild, relocated parental, and common garden offspring toads collected in September 2017.
Sample: wild toad
SAMN30801740 • SRS15099236 • All experiments • All runs
Organism: skin metagenome
Library:
Name: QI_9
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 56,727 spots, 33.3M bases, 18.7Mb
Run# of Spots# of BasesSizePublished
SRR2155336156,72733.3M18.7Mb2023-02-21

ID:
24434494

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