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SRX18157894: GSM6706756: ATCC2001 cells rep2; Nakaseomyces glabratus CBS 138; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 27.5M spots, 8.3G bases, 2.5Gb downloads

External Id: GSM6706756_r1
Submitted by: Department of laboratory medicine, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine
Study: Effect of Cdc50 knockout on gene expression in Candida glabrata
PRJNA897921 • SRP406136 • All experiments • All runs
show Abstracthide Abstract
To estiamte the role lipid flippase subunit Cdc50 plays in Candida glabrata, a ?cdc50 null mutant was constructed based on standard strain ATCC2001 (wild type, WT) through homologous recombination. Then, gene expression profiling analysis was performed using data obtained from RNA-seq of WT and ?cdc50 mutant. Overall design: Comparative gene expression profiling analysis of RNA-seq data for ATCC2001 yeasts and its ?cdc50 null mutant.
Sample: ATCC2001 cells rep2
SAMN31592265 • SRS15658070 • All experiments • All runs
Organism: Nakaseomyces glabratus CBS 138
Library:
Name: GSM6706756
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA was extracted from the tissue using TRIzol Reagent and genomic DNA was removed using DNase I. RNA-seq transcriptome library was prepared following TruSeq RNA sample preparation Kit from Illumina using 1μg of total RNA.
Runs: 1 run, 27.5M spots, 8.3G bases, 2.5Gb
Run# of Spots# of BasesSizePublished
SRR2217922727,482,2208.3G2.5Gb2023-03-01

ID:
25140253

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