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SRX19686277: GSM7100758: 904-3 sensitive CDC control; Trichomonas vaginalis; RNA-Seq
1 ILLUMINA (Illumina HiSeq 4000) run: 31.8M spots, 9.5G bases, 2.9Gb downloads

External Id: GSM7100758_r1
Submitted by: STD research program, Medicine-Infectious Diseases, The University of Alabama at Birmingham
Study: Identification of Trichomonas vaginalis 5-nitroimidazole resistance targets
PRJNA945071 • SRP427550 • All experiments • All runs
show Abstracthide Abstract
We aimed to delineate mechanisms of T. vaginalis resistance using transcriptome profiling of metronidazole (MTZ)-resistant and sensitive T. vaginalis clinical isolates. Overall design: RNA sequencing, bioinformatics, and biostatistical analyses were performed to identify differentially expressed genes (DEGs) in the MTZ-resistant vs. sensitive T. vaginalis isolates.
Sample: 904-3 sensitive CDC control
SAMN33773577 • SRS17055558 • All experiments • All runs
Organism: Trichomonas vaginalis
Library:
Name: GSM7100758
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: RNA was harvested using Trizol reagent (Invitrogen, Carlsbad, CA), according to the manufacturer's instructions. Pre-made library -- no library preparation performed
Runs: 1 run, 31.8M spots, 9.5G bases, 2.9Gb
Run# of Spots# of BasesSizePublished
SRR2387424331,810,9429.5G2.9Gb2023-04-30

ID:
26993830

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