GSM8110881: Control ChIP-seq from ovary (ENCLB523DAR); Homo sapiens; ... - SRA

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SRX23750491: GSM8110881: Control ChIP-seq from ovary (ENCLB523DAR); Homo sapiens; ChIP-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 37.4M spots, 1.9G bases, 1.2Gb downloads

Submitted by: NCBI (GEO)

Study: GSE59395: Genome-wide map of regulatory interactions in the human genome

PRJNA63443 • SRP012412 • All experiments • All runs

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Summary: We generated a genome-wide interaction map of regulatory elements in human cells (K562, GM12878) using Chromatin Interaction Analysis by Paired-End Tag sequencing (ChIA-PET) experiments targeting six broadly distributed factors. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf Overall Design: Chromatin interactions identified by ChIA-PET for 4 different histone modifications, RAD21 and RNAPII in K562 cell line, two biological replicates each.

Sample: ENCODE biosample ENCBS341OKA

SAMN40088297 • SRS20576719 • All experiments • All runs

Organism: Homo sapiens

Library:

Instrument: Illumina HiSeq 2500

Strategy: ChIP-Seq

Source: GENOMIC

Selection: ChIP

Layout: SINGLE

Construction protocol: general protocol: https://www.encodeproject.org/documents/3e1af288-ddf9-4600-a9a2-48f18655d36a/@@download/attachment/Reference%20Epigenome%3A%20ChIP-Seq%20Input%20from%20Human%20Ovary%20Tissue%7C%7CSun%20Sep%2030%2013%3A35%3A23%20-0500%202012%7C%7C60676.txt

Experiment attributes:

GEO Accession: GSM8110881

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 37.4M spots, 1.9G bases, 1.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR28105380	37,420,332	1.9G	1.2Gb	2024-03-08

ID:: 32040575

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Sequence Read Archive

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