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DRX051558: Illumina MiSeq paired end sequencing ofSAMD00048498:ST5e4_2
1 ILLUMINA (Illumina MiSeq) run: 115,000 spots, 47M bases, 30.3Mb downloads

Submitted by: Japan Agency for Marine-Earth Science and Technology (JAMSTEC)
Study: Quantitative Sequencing by using random-sequence barcodes
show Abstracthide Abstract
A novel method for quantitative sequencing enabling absolute quantification of template DNA molecule with sequence information was developed. For testing the concept of method, environmental samples from paddy field soil and beach sand were used.In addition, we validated the method with mock microbial communities which consist gDNA of Methanocaldococcus jannaschii, Halomonas elongata, Sulfolobus tokodaii, Bacillus subtilis subsp. subtilis, Streptomyces avermitilis, and Paracoccus denitrificans.
Sample: 16S rRNA gene of S.tokodaii ID ST5e4_2
SAMD00048498 • DRS033203 • All experiments • All runs
Library:
Name: ST5e4_2
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Construction protocol: Random-tag qantitative sequence (Ratq-seq) was applied. Primer sequences were not removed. Eight bases at both ends are random-tag (N8).
Spot descriptor:
forward154  reverse

Runs: 1 run, 115,000 spots, 47M bases, 30.3Mb
Run# of Spots# of BasesSizePublished
DRR056922115,00047M30.3Mb2016-08-02

ID:
2869088

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