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SRX4510343: GSM3319349: DGRP-229_Infected; Drosophila melanogaster; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 26.6M spots, 2.7G bases, 1.7Gb downloads

Submitted by: NCBI (GEO)
Study: RNA-sequencing of the female adult fly guts from 38 DGRP lines with and without oral infection with Pseudomonas entomophila
PRJNA484700 • SRP156430 • All experiments • All runs
show Abstracthide Abstract
In order to gain insights into gut immunocompetence and its variation in a population, we performed RNA-sequencing of whole guts of 38 Drosophila Genetic Reference Panel strains. Overall design: 76 gut samples profiled from 38 DGRP strains under two conditions: control and infected with Pseudomonas entomophila.
Sample: DGRP-229_Infected
SAMN09768084 • SRS3629753 • All experiments • All runs
Organism: Drosophila melanogaster
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: For each condition, guts from 30 adult female flies were collected in PBS four hours post treatment and directly homogenized in trizol (Invitrogen) using a bead-beater. A standard protocol for RNA extraction was performed. Illumina stranded Truseq libraries
Experiment attributes:
GEO Accession: GSM3319349
Links:
Runs: 1 run, 26.6M spots, 2.7G bases, 1.7Gb
Run# of Spots# of BasesSizePublished
SRR764739626,643,0052.7G1.7Gb2019-10-07

ID:
6108009

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