Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX368168: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279962' containing sample 'Staphylococcus aureus M1460'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.9M spots, 786M bases, 355.4Mb downloads

UUID: af3fb80a-89a8-41df-8eec-51eec0efc261

Design: Illumina sequencing of Staphylococcus aureus M1460 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218446 • SRP032150 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1460

SAMN02350625 • SRS494209 • All experiments • All runs

Organism: Staphylococcus aureus M1460

Library:

Name: Pond-279962

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402414.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJOS

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47909

research_project: RP-433

root_sample_id: SM-4CWAA

sample_id: SM-4VJOS

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.9M spots, 786M bases, 355.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017469	1,942,561	392.4M	177.2Mb	2013-10-25
SRR1017470	1,948,488	393.6M	178.2Mb	2013-10-25

ID:: 526799

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