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SRX122628: GSM881349: E14_d0_H3K27ac_ChIP-seq; Mus musculus; ChIP-Seq
1 ILLUMINA (Illumina Genome Analyzer II) run: 19.8M spots, 1.5G bases, 919.4Mb downloads

Submitted by: NCBI (GEO)
Study: Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells
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Genome-wide analysis of histone modification (H2AZ, H3K27ac, H3K27me3, H3K36me3, H3K4me1, H3K4me2, H3K4me3 and H3K9me3), protein-DNA binding (TAF1, P300, Pou5f1 and Nanog), cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells We generated histone modification data (H2AZ, H3K27ac, H3K27me3, H3K36me3, H3K4me1, H3K4me2, H3K4me3 and H3K9me3) and protein-DNA binding data (TAF1, P300, Pou5f1 and Nanog) using Chromatin Immunoprecipitation followed by short sequencing (ChIP-seq), cytosine methylation data using methylated DNA immunoprecipitation followed by sequencing (MeDIP-seq) and DNA digestion by methyl-sensitive restriction enzymes followed by sequencing (MRE-seq), transcriptome data with RNA short sequencing (RNA-seq) in human embryonic stem cells, mouse embryonic stem cells, pig induced pluripotent stem cells and mouse embryonic stem cells under activin-A-induced-differentiation. Overall design: Examination of 8 histone modifications, 4 protein-DNA binding, cytosine methylation and transcriptome in human embryonic stem cells, mouse embryonic stem cells, pig induced pluripotent stem cells and mouse embryonic stem cells under activin-A-induced-differentiation.
Sample: E14_Day0_H3K27ac_ChIP-seq
SAMN00792878 • SRS295497 • All experiments • All runs
Organism: Mus musculus
Library:
Name: GSM881349: E14_d0_H3K27ac_ChIP-seq
Instrument: Illumina Genome Analyzer II
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Spot descriptor:
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Experiment attributes:
GEO Accession: GSM881349
Links:
Runs: 1 run, 19.8M spots, 1.5G bases, 919.4Mb
Run# of Spots# of BasesSizePublished
SRR41493619,780,9771.5G919.4Mb2012-03-01

ID:
140677

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