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SRX12453473: GSM5607879: AH2-6; Rattus norvegicus; RNA-Seq
1 ILLUMINA (NextSeq 500) run: 33.3M spots, 2.5G bases, 977.2Mb downloads

External Id: GSM5607879_r1
Submitted by: Psychobiology, Universidad Nacional de Educación a Distancia (UNED)
Study: Gene expression profiling of the nucleus accumbens and dorsolateral striatum in a two-hit model combining maternal immune activation and peripubertal stress in rats
show Abstracthide Abstract
Substance use disorders are more prevalent in schizophrenia, worsening its course and prognosis. Here, we used a double-hit rat model, combining maternal immune activation (MIA) and peripubertal stress (PUS), to study cocaine addiction and the underlying neurobehavioral alterations. We injected lipopolysaccharide (LPS) or saline on gestational days 15 and 16 to pregnant rats. Their male offspring were then subjected to unpredictable stress during adolescence. When rats reached adulthood, we studied their cocaine addiction-like behavior, impulsivity and conditioning processes, and several aspects of brain structure and function by MRI, PET and RNAseq. MIA facilitated the acquisition of cocaine self-administration but PUS reduced cocaine intake, an effect that was reversed by MIA. MIA increased motivation for cocaine and revearsed the effects of PUS during extended access. Incubation of seeking was unaffected. Neither hit alone nor their combination impacted pavlovian or instrumental learning or impulsiveness. At the brain level, PUS reduced hippocampal volume and hyperactivated the dorsal subiculum. When combined, both hits altered the structure and function of the dorsal striatum increasing its volume and interferring with glutamatergic dynamics. MIA alone had no effect on the gene expression of the nucleus accumbens but, when combined with PUS, modulated specific genes that could account for the decreased cocaine intake. PUS had a profund effect on the dorsal striatal transcriptome however, this was obliterated when PUS occurred in animals with MIA. These results describe a complex interplay between MIA and stress on neurodevelopment and in the susceptibility to develop cocaine addiction. Overall design: Gene expression profiles of the nucleus accumbens and dorsolateral striatum of male Sprague-Dawley rats after prenatal immune activation induced by LPS administration and peripubertal unpredictable stress. We analysed 24 samples (3 per group) corresponding to experimental groups (including saline-exposed and/or non-stressed controls).
Sample: AH2-6
SAMN22014105 • SRS10419512 • All experiments • All runs
Library:
Name: GSM5607879
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Samples were homogenized, and RNA extracted according to the protocol, tools and reagents provided by RNeasy Mini Kit (Qiagen). Libraries were prepared according to the instructions of the NEBNext Ultra Directional RNA Library Prep kit for Illumina kit (New England Biolabs), as detailed in “Chapter 1: Protocol for use with NEBNext Poly(A) mRNA Magnetic Isolation Module”. The input yield of total RNA to start the protocol was 1 µg quantified by an Agilent 2100 Bioanalyzer using an RNA 6000 nano LabChip kit. We performed the library amplification included in the cited protocol using a PCR of 14 cycles. The obtained libraries were validated and quantified by an Agilent 2100 Bioanalyzer using a DNA7500 LabChip kit and an equimolecular pool of libraries were titrated by quantitative PCR using the “Kapa-SYBR FAST qPCR kit forLightCycler480” (Kapa BioSystems) and a reference standard for quantification.
Runs: 1 run, 33.3M spots, 2.5G bases, 977.2Mb
Run# of Spots# of BasesSizePublished
SRR1616866933,319,7102.5G977.2Mb2021-10-04

ID:
16891419

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