GSM2123696: ARGFX rep 3; Homo sapiens; RNA-Seq - SRA

SRX1704919: GSM2123696: ARGFX rep 3; Homo sapiens; RNA-Seq
2 ILLUMINA (Illumina HiSeq 4000) runs: 32.8M spots, 4.9G bases, 1.9Gb downloads

Submitted by: NCBI (GEO)

Study: Evolutionary origin and functional divergence of stem cell homeobox genes in eutherian mammals

PRJNA318494 • SRP073307 • All experiments • All runs

show Abstracthide Abstract

We individually examined the ability of human ARGFX, DPRX, LEUTX, and TPRX1 to regulate gene expression by ectopically expressing these proteins in fibroblasts. Overall design: Each gene along with an empty control vector were transfected individually to drive ectopic expression in human dermal fibroblasts, in triplicate.

Sample: ARGFX rep 3

SAMN04859250 • SRS1400002 • All experiments • All runs

Organism: Homo sapiens

Library:

Instrument: Illumina HiSeq 4000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: RNA was extracted using a RNeasy Mini Kit following the manufactures instructions with the addition of an on-column DNase treatment. RNA libraries were prepared for sequencing using standard Illumina protocols RNA-Seq; each library split across two lanes HiSeq4000, 15 half-libraries per lane

Experiment attributes:

GEO Accession: GSM2123696

Links:

NCBI link: NCBI Entrez (gds)

Runs: 2 runs, 32.8M spots, 4.9G bases, 1.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR3383328	16,662,675	2.5G	996.3Mb	2016-05-27
SRR3383329	16,140,657	2.4G	976Mb	2016-05-27

ID:: 2442067

SRA

Sequence Read Archive

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