GSM2190720: siChaer; Rattus norvegicus; RNA-Seq - SRA

SRX1828326: GSM2190720: siChaer; Rattus norvegicus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 56.4M spots, 5.6G bases, 3.2Gb downloads

Submitted by: NCBI (GEO)

Study: LncRNA Chaer contributes to the transcriptome reprogramming during phenylephrine-induced hypertrophy in neonatal rat ventricular myocytes

PRJNA324677 • SRP076227 • All experiments • All runs

show Abstracthide Abstract

We compared the transcriptome modified by siRNA-mediated cardiac hypertrophy associated epigenentic regulator (Chaer) with negative control siRNA treated neonatal rat ventricular myocytes with or without phenylephrine treatment. The results suggest that Chaer knockdown broadly blocks the phenylephrine-induced hypertrophic programming of the transcriptome. Overall design: Transcripts profiles from neonatal rat ventricular myocytes with or without phenylephrine and with or without Chaer-specific siRNA compared to negative control siRNA

Sample: siChaer

SAMN05213406 • SRS1490143 • All experiments • All runs

Organism: Rattus norvegicus

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: Total RNAs were extracted with TRIzol reagents. TruSeq Stranded RNA library prep with 8 base indexing

Experiment attributes:

GEO Accession: GSM2190720

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 56.4M spots, 5.6G bases, 3.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR3643463	56,418,062	5.6G	3.2Gb	2016-06-30

ID:: 2611496

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