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SRX21301771: GSM7697407: E4_3_SUM149+ETX; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 23.8M spots, 7.1G bases, 2.2Gb downloads

External Id: GSM7697407_r1
Submitted by: Kaipparettu Lab, Department of Molecular and Human Genetics, Baylor College Of Medicine
Study: Metabolomic Rewiring in Endocrine Therapy-Resistant Estrogen Receptor Positive Breast Cancer
PRJNA1003494 • SRP454077 • All experiments • All runs
show Abstracthide Abstract
We report mRNA profiles of human breast cancer cell lines, SUM159 and SUM149,which are modulated fatty acid beta oxidation (FAO) pathway either pharmacologically using Etomoxir (ETX) or genetically (shRNA). The optimized data analysis workflows reported here should provide a framework for comparative investigations of expression profiles. Overall design: mRNA profiles of human breast cancer cell lines after modifying fatty acid beta oxidation (FAO)
Sample: E4_3_SUM149+ETX
SAMN36892939 • SRS18550573 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: GSM7697407
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA was extracted using RNeasy Mini Kit (Qiagen) RNA libraries were prepared for sequencing using standard Illumina protocols
Runs: 1 run, 23.8M spots, 7.1G bases, 2.2Gb
Run# of Spots# of BasesSizePublished
SRR2557310423,772,5557.1G2.2Gb2023-10-25

ID:
28738903

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