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SRX21818680: GSM7789496: uninfected tick 3; Rhipicephalus microplus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 10.7M spots, 2.1G bases, 1.3Gb downloads

External Id: GSM7789496_r1
Submitted by: USDA ARS Animal Disease Research Unit
Study: Rhipicephalus microplushemocyte innate cellular and humoral immune responses to babesialinfection
show Abstracthide Abstract
To understand the effect of Babesia infection on Rhipicephalus microplus hemocyte gene expression, we performed high throughput RNA-sequencing using samples collected from Rhipicephalus microplus uninfected tick hemolymph and infected with either Babesia bigemina or Babesia bovis. We evaluated gene expression differences that may be attributed to tick immune defense to babesial infection. Overall design: Parasite mRNA isolated from 3 biological replicates for each of 1) uninfected tick hemolymph, 2) Babesia bigemina kinete stage parasites from infected tick hemolymph, and 3) Babesia bovis kinete stage parasites from infected tick hemolymph, were compared by RNAseq methodology using Illumina technology.
Sample: uninfected tick 3
SAMN37446239 • SRS18919421 • All experiments • All runs
Library:
Name: GSM7789496
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: TriZol extraction Illumina TruSeq mRNA, poly A selected
Runs: 1 run, 10.7M spots, 2.1G bases, 1.3Gb
Run# of Spots# of BasesSizePublished
SRR2610423610,736,8902.1G1.3Gb2023-12-31

ID:
29624804

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