U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX2833537: GSM2631707: Control tumor 2; Mus musculus; RNA-Seq
1 ION_TORRENT (Ion Torrent Proton) run: 4.1M spots, 445.4M bases, 246.7Mb downloads

Submitted by: NCBI (GEO)
Study: Transcriptomic analysis in murine mammary carcinoma tissue after treatment with control vehicle or abemaciclib
show Abstracthide Abstract
We measured changes in expression of 3,826 genes in MMTV-rtTA/tetO-HER2 mammary carcinoma tissue after treatment with control vehicle or abemaciclib Overall design: Examination of changes in gene expression in 23 tumors (11 control, 12 abemaciclib)
Sample: Control tumor 2
SAMN07140271 • SRS2208170 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Ion Torrent Proton
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Tumor tissue was snap frozen w hours after the 12th dose of treatment. Total RNA was extracted using the Macherey Nagel RNA Plus kit cDNA libraries were constructed using the Ion AmpliSeq AmpliSe DNA and RNA Library kit with custome primers(Thermo Fisher) An Ion AmpliSeq™ Custom Panel was designed by the manufacturer (thermo Fisher) using Ion AmpliSeq™ Designer for targeted amplification of 3826 mouse genes , A short amplicon (~110 bp) is amplified for each target
Experiment attributes:
GEO Accession: GSM2631707
Links:
Runs: 1 run, 4.1M spots, 445.4M bases, 246.7Mb
Run# of Spots# of BasesSizePublished
SRR55752374,082,603445.4M246.7Mb2017-08-17

ID:
4069693

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...