GSM1190740: Stat1_KO_LPS_4h_S42; Mus musculus; RNA-Seq - SRA

SRX325517: GSM1190740: Stat1_KO_LPS_4h_S42; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 639,904 spots, 160M bases, 87.4Mb downloads

Submitted by: Gene Expression Omnibus (GEO)

Study: Single-cell RNA-seq reveals dynamic paracrine control of cellular variation

PRJNA212439 • SRP027537 • All experiments • All runs

show Abstracthide Abstract

Here, we use a microfluidics-based approach to prepare single-cell RNA-Seq libraries from over 1,700 primary mouse dendritic cells (DCs) stimulated with three pathogenic components and examine variation between individual cells exposed to the same stimulus and general strategies that multicellular populations use to establish complex dynamic responses. Overall design: RNA seq libraries from 1775 single cells and population controls with SMARTer

Sample: Stat1_KO_LPS_4h_S42

SAMN02258027 • SRS461882 • All experiments • All runs

Organism: Mus musculus

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: cDNA from each sample was prepared using the SMARTer cDNA synthesis (Clontech). RNA libraries were prepared for sequencing using Nextera XT (Illumina).

Experiment attributes:

GEO Accession: GSM1190740

Links:

External link: GEO Sample

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 639,904 spots, 160M bases, 87.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR940034	639,904	160M	87.4Mb	2014-06-11

ID:: 454154

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Sequence Read Archive

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