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SRX4414171: GSM3295685: αGFP_5 [10_S10]; Homo sapiens; RNA-Seq
2 ILLUMINA (Illumina HiSeq 4000) runs: 20.3M spots, 2.2G bases, 803.5Mb downloads

Submitted by: NCBI (GEO)
Study: Diabetes Remission Using Glucose-Responsive Insulin-Producing Human a-Cells
show Abstracthide Abstract
Natural and stable cell identity switches, where terminally-differentiated cells convert into different cell-types when stressed, represent a widespread regenerative strategy in animals, yet they are poorly documented in mammals. In mice, some glucagon-producing pancreatic a-cells become insulin expressers upon ablation of insulin-secreting ß-cells, promoting diabetes recovery. Whether human islets also display this plasticity for reconstituting ß-like cells, especially in diabetic conditions, remains unknown. Here we show that two different islet non-ß-cell types, a- and ?–cells, obtained from deceased non-diabetic or diabetic human donors can be lineage-traced and induced to produce insulin and secrete it in response to glucose. When transplanted into diabetic mice, converted human a-cells reverse diabetes and remain producing insulin even after 6 months. Insulin-producing a-cells maintain a-cell markers, as seen by deep transcriptomic and proteomic characterization, and display hypo-immunogenic features when exposed to T-cells derived from diabetic patients. These observations provide conceptual evidence and a molecular framework for a mechanistic understanding of in situ cell plasticity in islet cells, as well as in other organs, as a therapy for degenerative diseases by fostering the highly-regulated intrinsic cell regeneration. Overall design: Transcriptomic profiles of human pancreatic a-cells that convert into insulin-producing cells were generated by deep sequencing using Illumina Hi-seq 4000
Sample: αGFP_5 [10_S10]
SAMN09698352 • SRS3567494 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Total RNA was extracted using the Qiagen RNeasy Micro kit, and treated with RNase-free DNaseI (Qiagen) Extracted RNA sample was assessed for the quality by Agilent bioanalyzer prior to library generation. Reverse transcription and cDNA amplification were performed using the SMARTer Ultra Low RNA kit (Clontech). cDNA library was prepared using Nextera XT DNA Sample Preparation kit (Illumina), and multiplexed.
Experiment attributes:
GEO Accession: GSM3295685
Links:
Runs: 2 runs, 20.3M spots, 2.2G bases, 803.5Mb
Run# of Spots# of BasesSizePublished
SRR754793910,475,7031.2G425.6Mb2018-12-14
SRR75479409,845,5161.1G377.9Mb2018-12-14

ID:
5996475

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