GSM4271587: P10; Sus scrofa; miRNA-Seq - SRA

SRX7556653: GSM4271587: P10; Sus scrofa; miRNA-Seq
1 ILLUMINA (Illumina Genome Analyzer) run: 17.7M spots, 868.1M bases, 581.9Mb downloads

Submitted by: NCBI (GEO)

Study: miRNA-seq data of PAMs from 4 pig breeds

PRJNA601199 • SRP241940 • All experiments • All runs

show Abstracthide Abstract

miRNA-seq data of pig alveolar macrophages from 4 pig breeds. Overall design: PRRSV-infected and uninfected PAMs were chosen to systematically investigate the effect of PRRSV infection on PAMs' miRNAomes of different pig breeds, 24 small RNA libraries from PRRSV-infected/uninfected PAMs in vitro were analyzed using Solexa/Illumina deep-sequencing technology.

Sample: P10

SAMN13860840 • SRS5994438 • All experiments • All runs

Organism: Sus scrofa

Library:

Instrument: Illumina Genome Analyzer

Strategy: miRNA-Seq

Source: TRANSCRIPTOMIC

Selection: size fractionation

Layout: SINGLE

Construction protocol: RNA was harvested using Trizol reagent. Total RNA were prepared for small RNA Sequencing by Synthesis according to the procedure and standards of the Illumina Sample Preparation Protocol.

Experiment attributes:

GEO Accession: GSM4271587

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 17.7M spots, 868.1M bases, 581.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR10887672	17,717,338	868.1M	581.9Mb	2022-11-10

ID:: 9871328

SRA

Sequence Read Archive

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