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SRX1808035: Escherichia coli 017PP2015
1 ILLUMINA (NextSeq 500) run: 5.3M spots, 1.2G bases, 586.6Mb downloads

Design: Nextera XT
Submitted by: University of Lodz
Study: Avian Pathogenic Escherichia coli (APEC) Genome sequencing and assembly
show Abstracthide Abstract
Avian Pathogenic Escherichia coli (APEC) is associated with colibacillosis which accounts for mortality and morbidity in poultry industry. However, up to now there has been no clear characteristics of pathogenicity and virulence genes of these bacteria. The aim of this work is to define virulence-associated factors which would be used in genotyping of APEC strains.Six environmental APEC strains, designated as 007PP2015, 009PP2015, 011PP2015, 012PP2015, 015PP2015, 016PP2015 were isolated from sick domestic birds in Poland. Their draft genome sequences are presented.
Sample: Avian pathogenic Escherichia coli sample from Gallus gallus domesticus (chicken)
SAMN05187185 • SRS1472923 • All experiments • All runs
Library:
Name: Nextera_XT_017PP2015
Instrument: NextSeq 500
Strategy: WGA
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 5.3M spots, 1.2G bases, 586.6Mb
Run# of Spots# of BasesSizePublished
SRR36053665,309,8021.2G586.6Mb2016-06-04

ID:
2584190

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