Whole genome shotgun sequencing of Escherichia coli by Illumina MiSeq - SRA

SRX730356: Whole genome shotgun sequencing of Escherichia coli by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 477,762 spots, 223.1M bases, 143.2Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention (EDLB-CDC)

Study: PulseNet Escherichia coli and Shigella genome sequencing

PRJNA218110 • SRP046387 • All experiments • All runs

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PulseNet STEC genome reference library

Sample:

SAMN03098237 • SRS719576 • All experiments • All runs

Organism: Escherichia coli

Library:

Name: Escherichia coli Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Escherichia coli.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.17

Runs: 1 run, 477,762 spots, 223.1M bases, 143.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1609703	477,762	223.1M	143.2Mb	2014-10-11

ID:: 1056268

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