Illumina MiSeq paired end sequencing of SAMD00275700 - SRA

DRX260899: Illumina MiSeq paired end sequencing of SAMD00275700
1 ILLUMINA (Illumina MiSeq) run: 741,175 spots, 382.4M bases, 209.1Mb downloads

Submitted by: KYUSH-MS

Study: Comparative genomic analysis of Shiga-toxin producing Escherichia coli

PRJDB8147 • DRP005500 • All experiments • All runs

show Abstracthide Abstract

To reveal a phylogenetic overview of Shiga-toxin producing Escherichia coli (STEC), we sequenced the STEC strains isolated from patients with or without symptoms, foods, animals, and environmental sources mainly in Japan and performed whole genome sequence-based phylogenetic analysis.

Sample: Escherichia coli O121:H19 strain 08E027

SAMD00275700 • DRS195705 • All experiments • All runs

Organism: Escherichia coli

Library:

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera DNA Library Preparation Kit

Spot descriptor:

1 forward259 reverse