Whole genome shotgun sequencing of Escherichia coli by illumina Miseq - SRA

SRX6663213: Whole genome shotgun sequencing of Escherichia coli by illumina Miseq
1 ILLUMINA (Illumina MiSeq) run: 1.7M spots, 500.8M bases, 188.2Mb downloads

Design: Nextera

Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)

Study: GenomeTrakr Project: Penn State University | Department of Food Science | Dudley Lab

PRJNA357722 • SRP101500 • All experiments • All runs

show Abstracthide Abstract

Whole genome sequencing of cultured E. coli as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.

Sample: Pathogen: environmental/food/other sample from Escherichia coli

SAMN12438638 • SRS5223462 • All experiments • All runs

Organism: Escherichia coli

Library:

Name: 10.0496

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 1.7M spots, 500.8M bases, 188.2Mb