Illumina MiSeq paired end sequencing of SAMD00166621 - SRA

DRX168689: Illumina MiSeq paired end sequencing of SAMD00166621
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 614.5M bases, 419.2Mb downloads

Submitted by: KYUSH-MS

Study: Comparative genomic analysis of Shiga-toxin producing Escherichia coli

PRJDB8147 • DRP005500 • All experiments • All runs

show Abstracthide Abstract

To reveal a phylogenetic overview of Shiga-toxin producing Escherichia coli (STEC), we sequenced the STEC strains isolated from patients with or without symptoms, foods, animals, and environmental sources mainly in Japan and performed whole genome sequence-based phylogenetic analysis.

Sample: Escherichia coli O145:H28 strain 112312

SAMD00166621 • DRS108670 • All experiments • All runs

Organism: Escherichia coli O145:H28

Library:

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera DNA Library Preparation Kit

Spot descriptor:

1 forward307243746 reverse