Illumina MiSeq paired end sequencing of SAMD00166623 - SRA

DRX168691: Illumina MiSeq paired end sequencing of SAMD00166623
1 ILLUMINA (Illumina MiSeq) run: 544,953 spots, 264.7M bases, 164.1Mb downloads

Submitted by: KYUSH-MS

Study: Comparative genomic analysis of Shiga-toxin producing Escherichia coli

PRJDB8147 • DRP005500 • All experiments • All runs

show Abstracthide Abstract

To reveal a phylogenetic overview of Shiga-toxin producing Escherichia coli (STEC), we sequenced the STEC strains isolated from patients with or without symptoms, foods, animals, and environmental sources mainly in Japan and performed whole genome sequence-based phylogenetic analysis.

Sample: Escherichia coli O145:H28 strain 112808

SAMD00166623 • DRS108672 • All experiments • All runs

Organism: Escherichia coli O145:H28

Library:

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera DNA Library Preparation Kit

Spot descriptor:

1 forward132328489 reverse