txid2[Organism] - Structure - NCBI

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Select item 2096191.

Molecular Structure Image for 7CPJ

ycbZ-stalled 70S ribosome[ANTIBIOTIC]

Taxonomy:: Escherichia coli, Escherichia coli 2362-75, Escherichia coli 113303, Escherichia coli H420, Escherichia coli K-12, Escherichia coli 907713, Escherichia coli UMEA 3718-1, Escherichia coli 2.3916, Escherichia coli KTE112, Escherichia coli 4.0522, Escherichia coli IAI39, Escherichia coli O26:H11, Escherichia coli KTE73, Escherichia coli MS 198-1, Escherichia coli MS 117-3, Escherichia coli HVH 87 (4-5977630), Escherichia coli M863, Escherichia coli 2-427-07_S4_C3, Escherichia coli KTE64, Escherichia coli O121:H19, Escherichia coli TA054, Escherichia coli DEC1D, Escherichia coli 3-373-03_S4_C2, Escherichia coli 99.0741, Escherichia coli KTE75, Escherichia coli O177, Escherichia coli MS 84-1, Escherichia coli G3/10, Escherichia coli H461, Escherichia coli 908573

Proteins:: 51
Nucleic acids:: (RNA)
Chemicals:: 2
modified:: 2023-04-11

MMDB ID:: 209619
PDB ID:: 7CPJ

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 1928452.

Molecular Structure Image for 6V3B

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state[RIBOSOME]

Taxonomy:: Acinetobacter sp. CIP 51.11, Acinetobacter beijerinckii ANC 3835, Acinetobacter baumannii AB0057, Acinetobacter sp. ANC 4470, Acinetobacter baumannii, Acinetobacter variabilis, Acinetobacter sp. 809848, Acinetobacter rudis CIP 110305, Acinetobacter sp. CIP 102082, Acinetobacter sp. ANC 5600, Acinetobacter sp. 263903-1, Acinetobacter venetianus

Proteins:: 48
Nucleic acids:: (RNA)
Chemicals:: 95
modified:: 2021-03-03

MMDB ID:: 192845
PDB ID:: 6V3B

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 1928443.

Molecular Structure Image for 6V3A

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA[RIBOSOME]

Taxonomy:: Acinetobacter sp. CIP 51.11, Acinetobacter beijerinckii ANC 3835, Acinetobacter baumannii AB0057, Acinetobacter sp. ANC 4470, Acinetobacter baumannii, Acinetobacter variabilis, Acinetobacter sp. 809848, Acinetobacter rudis CIP 110305, Acinetobacter sp. CIP 102082, Acinetobacter sp. ANC 5600, Acinetobacter sp. 263903-1, Acinetobacter venetianus

Proteins:: 48
Nucleic acids:: (RNA)
Chemicals:: 95
modified:: 2021-03-03

MMDB ID:: 192844
PDB ID:: 6V3A

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 1928434.

Molecular Structure Image for 6V39

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA[RIBOSOME]

Taxonomy:: Acinetobacter sp. CIP 51.11, Acinetobacter beijerinckii ANC 3835, Acinetobacter baumannii AB0057, Acinetobacter sp. ANC 4470, Acinetobacter baumannii, Acinetobacter variabilis, Acinetobacter sp. 809848, Acinetobacter rudis CIP 110305, Acinetobacter sp. CIP 102082, Acinetobacter sp. ANC 5600, Acinetobacter sp. 263903-1, Acinetobacter venetianus

Proteins:: 48
Nucleic acids:: (RNA)
Chemicals:: 117
modified:: 2021-03-03

MMDB ID:: 192843
PDB ID:: 6V39

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 1928465.

Molecular Structure Image for 6V3D

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit[RIBOSOME]

Taxonomy:: Acinetobacter sp. CIP 51.11, Acinetobacter beijerinckii ANC 3835, Acinetobacter baumannii AB0057, Acinetobacter sp. ANC 4470, Acinetobacter baumannii, Acinetobacter variabilis, Acinetobacter sp. 809848, Acinetobacter rudis CIP 110305, Acinetobacter sp. CIP 102082

Proteins:: 28
Nucleic acids:: (RNA)
Chemicals:: 108
modified:: 2024-03-11

MMDB ID:: 192846
PDB ID:: 6V3D

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 1928476.

Molecular Structure Image for 6V3E

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit[RIBOSOME]

Taxonomy:: Acinetobacter baumannii, Acinetobacter baumannii AB0057, Acinetobacter sp. ANC 5600, Acinetobacter sp. 263903-1, Acinetobacter venetianus

Proteins:: 19
Nucleic acids:: (RNA)
modified:: 2021-03-03

MMDB ID:: 192847
PDB ID:: 6V3E

View in iCn3D PubMed Proteins Conserved Domains

Select item 1891907.

Molecular Structure Image for 6OQW

E. coli ATP synthase State 3a[MEMBRANE PROTEIN]

Taxonomy:: Escherichia coli, Escherichia coli 2-427-07_S4_C3, Escherichia coli O145:NM, Escherichia coli chi7122, Escherichia coli Xuzhou21

Proteins:: 22
Chemicals:: 12
modified:: 2024-03-25

MMDB ID:: 189190
PDB ID:: 6OQW

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 1711298.

Molecular Structure Image for 4W29

70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state[RIBOSOME/Antibiotic]

Taxonomy:: Thermus thermophilus HB27, Thermus thermophilus HB8, Escherichia coli, Escherichia coli str. K-12 substr. MG1655, Thermus thermophilus

Proteins:: 55
Nucleic acids:: (RNA)
Chemicals:: 7
modified:: 2023-09-30

MMDB ID:: 171129
PDB ID:: 4W29

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 1710159.

Molecular Structure Image for 4V6M

Structure of the ribosome-SecYE complex in the membrane environment[RIBOSOME/RIBOSOMAL PROTEIN]

Taxonomy:: Escherichia coli, Escherichia coli DH1, Escherichia coli O157:H7, Homo sapiens, Escherichia coli K-12, Escherichia coli 536

Proteins:: 55
Nucleic acids:: (RNA)
Chemicals:: 133
modified:: 2024-03-05

MMDB ID:: 171015
PDB ID:: 4V6M

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 21479710.

Molecular Structure Image for 7QGN

Structure of the SmrB-bound E. coli disome - stalled 70S ribosome[RIBOSOME]

Taxonomy:: Escherichia coli, Vibrio alginolyticus, Escherichia coli K-12, Escherichia coli UMEA 3162-1

Proteins:: 53
Nucleic acids:: (RNA)
Chemicals:: 3
modified:: 2022-04-27

MMDB ID:: 214797
PDB ID:: 7QGN

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Select item 19564011.

Molecular Structure Image for 6ZY9

Cryo-EM structure of MlaFEDB in complex with AMP-PNP[LIPID TRANSPORT]

Taxonomy:: Escherichia coli B185, Escherichia coli, Escherichia coli 909945-2, Escherichia coli 2.3916

Proteins:: 12
Chemicals:: 4
modified:: 2021-01-25

MMDB ID:: 195640
PDB ID:: 6ZY9

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Select item 19563912.

Molecular Structure Image for 6ZY4

Cryo-EM structure of MlaFEDB in complex with ADP[LIPID TRANSPORT]

Taxonomy:: Escherichia coli B185, Escherichia coli, Escherichia coli 909945-2, Escherichia coli 2.3916

Proteins:: 12
Chemicals:: 4
modified:: 2021-01-25

MMDB ID:: 195639
PDB ID:: 6ZY4

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 19563813.

Molecular Structure Image for 6ZY3

Cryo-EM structure of MlaFEDB in complex with phospholipid[LIPID TRANSPORT]

Taxonomy:: Escherichia coli B185, Escherichia coli, Escherichia coli 909945-2, Escherichia coli 2.3916

Proteins:: 12
Chemicals:: 1
modified:: 2021-01-25

MMDB ID:: 195638
PDB ID:: 6ZY3

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 19563714.

Molecular Structure Image for 6ZY2

Cryo-EM structure of apo MlaFEDB[LIPID TRANSPORT]

Taxonomy:: Escherichia coli B185, Escherichia coli, Escherichia coli 909945-2, Escherichia coli 2.3916

Proteins:: 12
modified:: 2021-01-25

MMDB ID:: 195637
PDB ID:: 6ZY2

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 18747015.

Molecular Structure Image for 6PMJ

Sigm28-transcription initiation complex with specific promoter at the state 2[TRANSCRIPTION]

Taxonomy:: Escherichia coli O157:H7, Escherichia coli S88, Escherichia coli K-12, Escherichia coli

Proteins:: 6
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 3
modified:: 2024-03-25

MMDB ID:: 187470
PDB ID:: 6PMJ

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 18746916.

Molecular Structure Image for 6PMI

Sigm28-transcription initiation complex with specific promoter at the state 1[TRANSCRIPTION]

Taxonomy:: Escherichia coli O157:H7, Escherichia coli S88, Escherichia coli K-12, Escherichia coli

Proteins:: 6
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 3
modified:: 2024-03-25

MMDB ID:: 187469
PDB ID:: 6PMI

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 17116717.

Molecular Structure Image for 4YZV

Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon[RIBOSOME]

Taxonomy:: Thermus thermophilus HB8, Escherichia coli, Proteus vulgaris, Streptomyces alboniger

Proteins:: 50
Nucleic acids:: (RNA)
Chemicals:: 605
modified:: 2023-10-03

MMDB ID:: 171167
PDB ID:: 4YZV

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 17113818.

Molecular Structure Image for 4WOI

4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2[RIBOSOME]

Taxonomy:: Escherichia coli str. K-12 substr. MDS42, Escherichia coli K-12, Escherichia coli O157:H7 str. TW14359, Enterobacteria phage L1, Thermus thermophilus HB8

Proteins:: 51
Nucleic acids:: (RNA)
Chemicals:: 249
modified:: 2024-01-01

MMDB ID:: 171138
PDB ID:: 4WOI

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 17113519.

Molecular Structure Image for 4W4G

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon[RIBOSOME]

Taxonomy:: Thermus thermophilus HB8, Escherichia coli str. K-12 substr. MC4100, Escherichia coli, Proteus vulgaris

Proteins:: 50
Nucleic acids:: (RNA)
Chemicals:: 560
modified:: 2024-01-01

MMDB ID:: 171135
PDB ID:: 4W4G

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 17108820.

Molecular Structure Image for 4V8O

Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3[RIBOSOME]

Taxonomy:: Thermus thermophilus HB8, Escherichia coli K-12, Escherichia coli, Escherichia coli str. K-12 substr. DH10B

Proteins:: 52
Nucleic acids:: (RNA)
Chemicals:: 1
modified:: 2024-01-16

MMDB ID:: 171088
PDB ID:: 4V8O

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

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