National Center for
Biotechnology Information

5LZY: Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA

PDB ID:

MMDB ID:

171292

PDB Deposition Date:

2016/10/2

Updated in MMDB:

2024/05

Experimental Method:

electron microscopy

Resolution:

3.99 Å

Source Organism:

Oryctolagus cuniculus▼

Taxonomy	Molecule
Oryctolagus cuniculus	A, B, C, D, E, F, G, H, I, J, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i , j, k, l, m, n, o, p, r, s, t, 2, 3, 5, 7, 8, 9, AA, BB, CC, DD , EE, FF, GG, HH, II, JJ, KK, LL , MM, NN, OO, PP, QQ, RR, SS, TT , UU, VV, WW, XX, YY, ZZ, aa, bb , cc, dd, ee, ff, gg, hh
Homo sapiens	ii, jj

Similar Structures:

Biological Unit for 5LZY: 86-meric; determined by author

Molecular Components in 5LZY
Label	Count	Molecule
Proteins (79 molecules)
A	1	UL2
B	1	UL3
C	1	UL4
D	1	60S Ribosomal Protein L5
E	1	60S Ribosomal Protein L6
F	1	Ul30
G	1	EL8
H	1	UL6
I	1	Ribosomal Protein L10 (Predicted)
J	1	UL5
L	1	El13
M	1	El14
N	1	Ribosomal Protein L15
O	1	Ul13
P	1	Ul22
Q	1	El18
R	1	El19
S	1	El20
T	1	El21
U	1	El22
V	1	El14
W	1	El24
X	1	El23
Y	1	Ul24
Z	1	60S Ribosomal Protein L27
a	1	Ul15
b	1	El29
c	1	El30
d	1	El31
e	1	El32
f	1	El33
g	1	El34
h	1	Ul29
i	1	60S Ribosomal Protein L36
j	1	El37
k	1	El38
l	1	El39
m	1	El40
n	1	El41
o	1	El42
p	1	El43
r	1	El28
s	1	Ul10
t	1	Ul11
AA	1	US2
BB	1	40S Ribosomal Protein S3A
CC	1	US5
DD	1	US3
EE	1	ES4
FF	1	US7
GG	1	40S Ribosomal Protein S6
HH	1	ES7
II	1	ES8
JJ	1	Ribosomal Protein S9 (Predicted)
KK	1	Es10
LL	1	Us17
MM	1	40S Ribosomal Protein S12
NN	1	Us15
OO	1	Us11
PP	1	Us19
QQ	1	US9
RR	1	Es17
SS	1	Us13
TT	1	Es19
UU	1	Us10
VV	1	Es21
WW	1	US8
XX	1	Us12
YY	1	Es24
ZZ	1	Es25
aa	1	Es26
bb	1	40S Ribosomal Protein S27
cc	1	Es28
dd	1	Us14
ee	1	Es30
ff	1	Es31
gg	1	Rack1
ii	1	Protein Pelota Homolog
jj	1	Hbs1-like Protein
Nucleotides(7 molecules)
2 3	2	tRNA
5	1	28S Ribosomal RNA
7	1	5S Ribosomal RNA
8	1	5.8s Ribosomal RNA
9	1	18S Ribosomal RNA
hh	1	mRNA (Polyadenylated)
Chemicals and Non-standard biopolymers (245 molecules)
1	236	MAGNESIUM ION
2	8	ZINC ION
3	1	PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER

* Click molecule labels to explore molecular sequence information.

Citing MMDB