5TZS: Architecture of the yeast small subunit processome

PDB ID: 5TZSDownload
MMDB ID: 165579
PDB Deposition Date: 2016/11/22
Updated in MMDB: 2022/11
Experimental Method:
electron microscopy
Resolution: 5.1  Å
Source Organism:
Similar Structures:
Molecular Components in 5TZS
Label Count Molecule
Proteins (52 molecules)
1
40S Ribosomal Protein S6-a
(Gene symbol: RPS6B)
Molecule annotation
1
40S Ribosomal Protein S4-a
(Gene symbol: RPS4A)
Molecule annotation
1
40S Ribosomal Protein S5
(Gene symbol: RPS5)
Molecule annotation
1
40S Ribosomal Protein S7-a
(Gene symbol: RPS7A)
Molecule annotation
1
40S Ribosomal Protein S8-a
(Gene symbol: RPS8A)
Molecule annotation
1
40S Ribosomal Protein S9-a
(Gene symbol: RPS9A)
Molecule annotation
1
40S Ribosomal Protein S16-a
(Gene symbol: RPS16B)
Molecule annotation
1
40S Ribosomal Protein S11-a
(Gene symbol: RPS11A)
Molecule annotation
1
40S Ribosomal Protein S22-a
(Gene symbol: RPS22A)
Molecule annotation
1
40S Ribosomal Protein S24-a
(Gene symbol: RPS24B)
Molecule annotation
1
40S Ribosomal Protein S28-a
(Gene symbol: RPS28A)
Molecule annotation
1
Utp4
Molecule annotation
1
Utpa_ctd1
Molecule annotation
2
Utpa_ctd2
Molecule annotation
1
Beta-propeller 2
Molecule annotation
1
Utp17
Molecule annotation
1
Utp1
Molecule annotation
1
Utp6
Molecule annotation
1
Utp12
Molecule annotation
1
Utp13
Molecule annotation
1
Utp18
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 21,utp21
(Gene symbol: UTP21)
Molecule annotation
1
Beta-propeller 5
Molecule annotation
1
Enp2
Molecule annotation
1
Utpa_ctd4
Molecule annotation
1
Kre33
Molecule annotation
1
Kre33
Molecule annotation
1
Imp3
Molecule annotation
1
Nop56
Molecule annotation
1
Nop58
Molecule annotation
1
Nop1
Molecule annotation
1
Nop1
Molecule annotation
2
13 KDA Ribonucleoprotein-associated Protein
(Gene symbol: SNU13)
Molecule annotation
1
Ribosomal RNA-processing Protein 9
(Gene symbol: RRP9)
Molecule annotation
1
RNA 3'-terminal Phosphate Cyclase-like Protein
(Gene symbol: RCL1)
Molecule annotation
1
Bms1,ribosome Biogenesis Protein Bms1,bms1,ribosome Biogenesis Protein Bms1
(Gene symbol: BMS1)
Molecule annotation
2
Ribosomal RNA Small Subunit Methyltransferase Nep1
(Gene symbol: EMG1)
Molecule annotation
1
Utp24
Molecule annotation
1
Imp4
Molecule annotation
1
Utp30
Molecule annotation
1
Unassigned KH Domain
Molecule annotation
1
Utp20
Molecule annotation
1
Repeat Protein 2
Molecule annotation
1
40S Ribosomal Protein S23-a
(Gene symbol: RPS23A)
Molecule annotation
3
Beta-propeller 1
Molecule annotation
1
Repeat Protein 1
Molecule annotation
1
Unassigned Protein Helices
Molecule annotation
Nucleotides(6 molecules)
1
5' External Transcribed Spacer
Molecule annotation
1
18S Ribosomal RNA
Molecule annotation
1
U3 Snorna
Molecule annotation
1
5' Domain-associated
Molecule annotation
1
3' Domain-associated
Molecule annotation
1
Unassigned RNA Helices
Molecule annotation
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303