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| Status |
Public on Dec 11, 2023 |
| Title |
Comparative transcriptional analysis of Candida auris biofilms following farnesol and tyrosol treatment |
| Organism |
[Candida] auris |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Candida auris is frequently associated with biofilm-related invasive infections. The resistant profile of these biofilms necessitates innovative therapeutic options, where quorum sensing may be a potential target. Farnesol and tyrosol are two fungal quorum-sensing molecules with antifungal effects at supraphysiological concentrations. Here, we performed genome-wide transcript profiling with C. auris biofilms following farnesol or tyrosol exposure using transcriptome sequencing (RNA-Seq). Since transition metals play a central role in fungal virulence and biofilm formation, levels of intracellular calcium, magnesium, and iron were determined following farnesol or tyrosol treatment using inductively coupled plasma optical emission spectrometry. Farnesol caused an 89.9% and 73.8% significant reduction in the calcium and magnesium content, respectively, whereas tyrosol resulted in 82.6%, 76.6%, and 81.2% decrease in the calcium, magnesium, and iron content, respectively, compared to the control. Genes involved in biofilm events, glycolysis, ergosterol biosynthesis, fatty acid oxidation, iron metabolism, and autophagy were primarily affected in treated cells. To prove ergosterol quorum-sensing molecule interactions, microdilution-based susceptibility testing was performed, where the complexation of farnesol, but not tyrosol, with ergosterol was impeded in the presence of exogenous ergosterol, resulting in a minimum inhibitory concentration increase in the quorum-sensing molecules. This study revealed several farnesol- and tyrosol-specific responses, which will contribute to the development of alternative therapies against C. auris biofilms.
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| Overall design |
Comparative gene expression profiling analysis of RNA-seq data of tyrosol and farnesol treated and untreated Candida auris biofilms.
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| Contributor(s) |
Jakab Á, Kovács F, Balla N, Nagy-Köteles C, Ragyák Á, Nagy F, Borman AM, Majoros L, Kovács R |
| Citation(s) |
38440972 |
| Submission date |
May 25, 2023 |
| Last update date |
Mar 12, 2024 |
| Contact name |
Agnes Jakab |
| E-mail(s) |
jakab.agnes@med.unideb.hu
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| Organization name |
University of Debrecen
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| Street address |
Nagyerdei krt 98.
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| City |
Debrecen |
| ZIP/Postal code |
4032 |
| Country |
Hungary |
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| Platforms (1) |
| GPL24811 |
Illumina NextSeq 500 ([Candida] auris) |
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| Samples (9)
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| Relations |
| BioProject |
PRJNA976246 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE233427_RNAseq_data.xlsx |
1.5 Mb |
(ftp)(http) |
XLSX |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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