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Series GSE27435 Query DataSets for GSE27435
Status Public on Feb 22, 2011
Title MicroRNA expression contributes to the poor prognosis of human small cell lung cancer
Platform organisms Homo sapiens; Mus musculus; Rattus norvegicus
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary MicroRNAs are important cellular components and their dysfunctions are associated with various disease.Small-cell lung cancer (SCLC) is an aggressive disease with a poor prognosis, but little is know about the underlying machinery that leads to rapid tumor growth and early metastases.In this study, clinical outcome prediction miRNAs were successfully found through expression profiling of a total of 924 miRNA genes in 42 SCLC cases.
 
Overall design 42 patients with respectable very limited disease (training set) were enrolled. All the patients underwent surgical resection followed by adjuvant chemotherapy according to the standard of care. Total RNA was extracted from formalin-fixed paraffin-embedded (FFPE)specimens, low molecular weight RNA was seperate and labeled , and then hybridized to capitalbio V3 biochip representing about 924 microRNA . three chip were test in each group, and the procedure was repeated twice.
 
Contributor(s) Cao J, Song Y, Bi N, Wang L, Zhan Q
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Submission date Feb 22, 2011
Last update date Mar 23, 2012
Contact name nan bi
E-mail(s) binan.email@gmail.com
Organization name Cancer Hospital and Cancer Institute
Street address Panjiayuannanli 17#
City Beijing
ZIP/Postal code 100021
Country China
 
Platforms (1)
GPL8469 Capitalbio mammal microRNA V3.0
Samples (42)
GSM678225 Patient 1
GSM678226 Patient 2
GSM678227 Patient 3
Relations
BioProject PRJNA137081

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE27435_RAW.tar 5.5 Mb (http)(custom) TAR (of LSR)
Processed data included within Sample table

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