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Series GSE51560 Query DataSets for GSE51560
Status Public on Oct 23, 2013
Title Comparative transcriptome analysis of geographically distinct virulent and attenuated Babesia bovis
Organism Babesia bovis
Experiment type Expression profiling by high throughput sequencing
Summary Geographical distinct virulent Babesia bovis strains have similar gene expression changes as they go through attenuation.
 
Overall design Pair end RNA-sequencing reads on three biological replicate sample pairs of virulent parent and attenuated derivative Babesia bovis strain isolated in Argentina.
 
Contributor(s) Lau A
Citation(s) 24195453
Submission date Oct 22, 2013
Last update date May 15, 2019
Contact name Audrey Oi-ting Lau
E-mail(s) laua@vetmed.wsu.edu
Phone 509-335-6072
Organization name Washington State University
Department Veterinary Microbiology & Pathology
Street address PO Box 647040
City Pullman
State/province Washington State University
ZIP/Postal code 99164
Country USA
 
Platforms (1)
GPL17815 Illumina HiSeq 2000 (Babesia bovis)
Samples (6)
GSM1248432 attenuated strain [A1]
GSM1248433 attenuated strain [A2]
GSM1248434 attenuated strain [A3]
Relations
BioProject PRJNA223413
SRA SRP031834

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51560_counts.txt.gz 64.7 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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