|
| Status |
Public on Jul 13, 2016 |
| Title |
CpG island methylation profile in non-invasive oral rinse samples is predictive of oral and pharyngeal carcinoma |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by array
|
| Summary |
Epigenome-wide association study (EWAS) of oral rinse samples from a case-control study of 154 cases and 72 controls. The Illumina Infinium HumanMethylation450 Beadchip was used to obtain DNA methylation profiles across approximately 450,000 CpGs in oral rinse samples.
|
| |
|
| Overall design |
Bisulphite converted DNA from the 226 oral rinse samples were hybridized to the Illumina Infinium HumanMethylation450 Beadchip
|
| |
|
| Contributor(s) |
Langevin SM, Kelsey KT |
| Citation(s) |
26635906 |
| Submission date |
Jul 15, 2015 |
| Last update date |
Mar 22, 2019 |
| Contact name |
Scott M Langevin |
| E-mail(s) |
langevst@uc.edu
|
| Phone |
513-558-1066
|
| Organization name |
University of Cincinnati College of Medicine
|
| Department |
Department of Environmental Health
|
| Lab |
Langevin
|
| Street address |
160 Panzeca Way, ML0056
|
| City |
Cincinnati |
| State/province |
OH |
| ZIP/Postal code |
45267 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
|
| Samples (223)
|
|
| Relations |
| BioProject |
PRJNA290086 |
Less...
More...