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Series GSE83084 Query DataSets for GSE83084
Status Public on Jun 08, 2016
Title alphaT-catenin in restricted brain cell types and its potential connection to autism
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq analysis was performed between WT and alphaT-cat KO mouse cerebella aiming to discover gene transcripts altered by the loss of alphaT-cat
These altered gene transcripts could be associated with several neurologic disease-relevant pathways
 
Overall design Total RNA extracted of cerebellar tissue (n=3) from the brains of WT ad alphaT-cat KO mice
 
Contributor(s) Folmsbee SS, Wilcox DR, Tyberghein K, De Bleser P, Tourtellotte WG, van Hengel J, van Roy F, Gottardi CJ
Citation(s) 27330745
Submission date Jun 07, 2016
Last update date May 15, 2019
Contact name Cara J Gottardi
E-mail(s) c-gottardi@northwestern.edu
Phone (312) 503-4123
Organization name Northwestern University
Department Departments of Medicine
Lab Cellular and Molecular Biology
Street address 240 East Huron St., McGaw Pavilion, M-323
City Chicago
ZIP/Postal code IL 60611
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM2192707 WT rep 1
GSM2192708 WT rep 2
GSM2192709 WT rep 3
Relations
BioProject PRJNA324710
SRA SRP076238

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83084_WTvsKO_processed.txt.gz 456.5 Kb (ftp)(http) TXT
GSE83084_WTvsKO_processed_statistical_analysis.xls.gz 3.6 Mb (ftp)(http) XLS
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Raw data are available in SRA
Processed data are available on Series record

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