|
| Status |
Public on Nov 01, 2015 |
| Title |
15-02-026-0 |
| Sample type |
genomic |
| |
|
| Source name |
nasal-epithelium
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: nasal-epithelium
asthma: FALSE
lnige: 3.8501
gender: Female
age: 11
race_hispanic: No
race_aa: Yes
race_a_carrib: No
race_white: No
race_asian: No
race_indian_alaska: No
site: Boston
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Allprep kit (Qiagen) for DNA and RNA
|
| Label |
Cy3,Cy5
|
| Label protocol |
DNA was bisulfite converted using the EZ DNA Methylation-Gold Kit (Zymo) followed by labeling following Illumina protocol
|
| |
|
| Hybridization protocol |
standard Illumina protocol
|
| Scan protocol |
standard Illumina protocol
|
| Description |
bisulfite
|
| Data processing |
SWAN normalization method
|
| |
|
| Submission date |
Jan 21, 2015 |
| Last update date |
Nov 01, 2015 |
| Contact name |
David Schwartz |
| E-mail(s) |
DAVID.SCHWARTZ@ucdenver.edu
|
| Phone |
303-724-1783
|
| Organization name |
University of Colorado, Anschutz Medical Campus
|
| Department |
Medicine
|
| Street address |
Anschutz Medical Campus
|
| City |
Aurora |
| State/province |
CO |
| ZIP/Postal code |
80045 |
| Country |
USA |
| |
|
| Platform ID |
GPL13534 |
| Series (2) |
| GSE65163 |
The Nasal Methylome and Childhood Atopic Asthma |
| GSE65205 |
Childhood Atopic Asthma |
|
