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Report for CCDS20986.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20986.1 Public Mus musculus 7 Ceacam2 23 108 98 CCDS HistoryNCBI Gene:26367Re-query CCDS DB by CCDS ID:20986.1Re-query CCDS DB by GeneID:26367See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20986.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064862.12 ENSMUSP00000068540.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064862.12Link to Ensembl Protein Viewer:ENSMUSP00000068540.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000064862Re-query CCDS DB by Protein ID:ENSMUSP00000068540
Original member Current member NCBI NM_007543.4 NP_031569.1 Accepted alive Link to Nucleotide Sequence:NM_007543.4Link to Protein Sequence:NP_031569.1Re-query CCDS DB by Nucleotide ID:NM_007543Re-query CCDS DB by Protein ID:NP_031569Link to BLAST:NP_031569.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031569.1 272 Q925P2-3 272 100% 0 0

Chromosomal Locations for CCDS 20986.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 25519190 25519190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25520814 25520931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25527741 25528016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25538574 25538933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25539701 25539764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (819 nt):
ATGGAGCTGGCCTCAGCACATCTCCACAAAGGGCAGGTTCCCTGGTTTGGACTACTGCTCACAGCCTCAC
TTTTAGCCTCCTGGAGCCCTCCCACCACTGCACAAGTGACTGTTATGGCTTTTCCACTCCACGCTGCTGA
AGGCAACAATGTTATTCTAGTTGTTTACAATATGATGAAGGGAGTCTCGGCCTTTAGCTGGCACAAGGGA
TCTACTACGTCTACAAATGCTGAAATTGTACGATTTGTAACAGGCACTAATAAGACTATAAAAGGGCCTG
TACACAGTGGCAGAGAGACACTATACAGCAATGGATCCCTGCTCATCCAAAGGGTCACCATGAAGGATAC
GGGAGTCTACACAATAGAAATGACAGATCAAAACTATCGTCGTAGGGTCCTGACTGGACAATTTCATGTA
CACAAGCCAGTGACTCAGCCCTCCCTCCAAGTCACCAACACCACAGTCAAAGAACTAGACTCTGTCACCC
TGACCTGCTTGTCGAAAGACCGTCAAGCCCACATCCATTGGATCTTCAACAATGATACTCTTCTAATCAC
AGAGAAGATGACAACCTCTCAGGCGGGACTCATCCTCAAAATAGACCCTATTAAGAGGGAAGATGCCGGC
GAGTATCAGTGTGAAATCTCGAATCCAGTCAGCGTCAAGAGGAGCAACTCAATCAAACTGGAAGTAATAT
TTGACTCAACATATGACATTTCAGATGTCCCCATTGCTGTAATCATAACTGGAGCTGTGGCCGGGGTGAT
TCTAATAGCAGGGCTGGCATATCGCCTCTGTTCCAGGAAGTCTCGCTGA

Translation (272 aa):
MELASAHLHKGQVPWFGLLLTASLLASWSPPTTAQVTVMAFPLHAAEGNNVILVVYNMMKGVSAFSWHKG
STTSTNAEIVRFVTGTNKTIKGPVHSGRETLYSNGSLLIQRVTMKDTGVYTIEMTDQNYRRRVLTGQFHV
HKPVTQPSLQVTNTTVKELDSVTLTCLSKDRQAHIHWIFNNDTLLITEKMTTSQAGLILKIDPIKREDAG
EYQCEISNPVSVKRSNSIKLEVIFDSTYDISDVPIAVIITGAVAGVILIAGLAYRLCSRKSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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