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Report for CCDS49719.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49719.1 Public Mus musculus 15 Or10ad1c 23 108 98 CCDS HistoryNCBI Gene:545140Re-query CCDS DB by CCDS ID:49719.1Re-query CCDS DB by GeneID:545140See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49719.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000165379.7 ENSMUSP00000132237.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000165379.7Link to Ensembl Protein Viewer:ENSMUSP00000132237.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000165379Re-query CCDS DB by Protein ID:ENSMUSP00000132237
Original member Current member NCBI NM_001011733.2 NP_001011733.2 Accepted alive Link to Nucleotide Sequence:NM_001011733.2Link to Protein Sequence:NP_001011733.2Re-query CCDS DB by Nucleotide ID:NM_001011733Re-query CCDS DB by Protein ID:NP_001011733Link to BLAST:NP_001011733.2

Chromosomal Locations for CCDS 49719.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 98186839 98187790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98189134 98189138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGAGGTCCCAGACAGCAGACCCGAAGAACAGCAGCAGCACTGTGACTGAGTTCATCCTCGTGGGCTTTG
AGCAGAGCTCCCCTTCCACACGGGCATTGCTCTTCACCCTCTTCCTGGCTCTCTACAGCCTCGCCATGGC
CATGAATGGCCTCATCATCTTCATCACATGGACTGACCCCAGGCTCAACAGCCCCATGTACTTCTTCCTT
GGACACCTGTCTTTCCTGGACGTCTGCTTCATCACCACCACCATCCCGCAGATGTTGGTCCATCTGGTGA
CCAAGAACCACACTGTCTCCTTTGTCTCTTGCATGACCCAGATGTACTTGGTCTTTCTAGTGGGTGTGGC
CGAGTGCATCCTCTTGGCTTTCATGGCCTATGATCGTTATGTTGCCATCTGCCACCCACTGAACTATGCC
CAGATCATGAGCCAGAAGGTGTGTGTCAGGCTGGTGTGTTCTTCCTGGATCTTTGGGATGGTCAATGGTA
TCTTTCTTGAGTATATATCATTCAGGAATCCCTTCTGCAAAGACAACCACATAGAGAACTTCTTCTGTGA
GGCTCCCATAGTGATCGCTCTCTCCTGCGGGGACCTCAAGTTCACCATGAAGTTGATCTTTGTGGATGCC
ATTGTGGTGTTGCTCAGTCCCATGGTGCTCATCATCACCTCCTATGCCCGCATCCTGGCCTCCATCCTCC
ACAGGGCCTCCTCCTCAAGCCATAGGAAGACCTTTTCTACTTGTGCCTCCCACCTGACTGTGGTCATCTT
TTTGTACACTTCAGCCATGTTTTCTTACATGAATCCCCGCAGTACACATGGGCCTGACAAAGACAAGTCT
TTCTCCCTCCTCTATACCATCATCATGCCCATGTGCAACCCGGTCATCTACAGCTTCCGCAACAAGGAAA
TGAAGGGGGCCATGGGGCGGGCTCTTGGGAGAGGCAGCCTGGCTTAG

Translation (318 aa):
MRSQTADPKNSSSTVTEFILVGFEQSSPSTRALLFTLFLALYSLAMAMNGLIIFITWTDPRLNSPMYFFL
GHLSFLDVCFITTTIPQMLVHLVTKNHTVSFVSCMTQMYLVFLVGVAECILLAFMAYDRYVAICHPLNYA
QIMSQKVCVRLVCSSWIFGMVNGIFLEYISFRNPFCKDNHIENFFCEAPIVIALSCGDLKFTMKLIFVDA
IVVLLSPMVLIITSYARILASILHRASSSSHRKTFSTCASHLTVVIFLYTSAMFSYMNPRSTHGPDKDKS
FSLLYTIIMPMCNPVIYSFRNKEMKGAMGRALGRGSLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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