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Report for CCDS26987.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26987.1 Public Mus musculus 14 Dlgap5 23 108 98 CCDS HistoryNCBI Gene:218977Re-query CCDS DB by CCDS ID:26987.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26987.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043296.9 ENSMUSP00000040416.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043296.9Link to Ensembl Protein Viewer:ENSMUSP00000040416.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000043296Re-query CCDS DB by Protein ID:ENSMUSP00000040416
Original member NCBI NM_144553.2 NP_653136.2 Updated not alive Link to Nucleotide Sequence:NM_144553.2Link to Protein Sequence:NP_653136.2Re-query CCDS DB by Nucleotide ID:NM_144553Re-query CCDS DB by Protein ID:NP_653136
Current member NCBI NM_144553.3 NP_653136.2 Accepted alive Link to Nucleotide Sequence:NM_144553.3Link to Protein Sequence:NP_653136.2Re-query CCDS DB by Nucleotide ID:NM_144553Re-query CCDS DB by Protein ID:NP_653136Link to BLAST:NP_653136.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653136.2 808 Q8K4R9-1 808 99.3812% 0 5

Chromosomal Locations for CCDS 26987.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 47388016 47388123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47389412 47389458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47390443 47390662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47391722 47391779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47394137 47394317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47395755 47395974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47398418 47398510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47399520 47399680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47401521 47401606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47405775 47405901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47406339 47406418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47407637 47407911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47410308 47410378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47411445 47411567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47411659 47411743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47412978 47413040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47413646 47413839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47416336 47416570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2427 nt):
ATGCTGGTGTCACGTTTTGCCAGTCGGTTTCGGAAAGACTCGAGCACTGAGATGGTTAGAACCAACTTGG
CTCATAGAAAGTCTCTGTCTCAGAAGGAGAACAGACACAGGGTGTATGAGCGAAACAGACACTTCGGTTT
GAAGGACGTCAACATTCCACTGGAAGGGCGAGAGCTTGGTAATATACACGAGACATCGCAAGACCTCTCT
CCAGAGAAGGCCAGCTCCAAAACAAGGTCAGTAAAAATGGTCCTGAGTGACCAACGGAAGCAGCTCCTCC
AGAAGTACAAGGAAGAAAAACAACTTCAAAAACTGAAAGAACAGCGAGAGAAAGCCAAACGTGGAGTGTT
CAAAGTGGGTCTCTATAGACCCGCTGCGCCTGGCTTTCTTGTCACAGACCAGAGGGGTGCGAAAGCTGAG
CCAGAAAAGGCTTTTCCACATACTGGACGGATTACAAGATCAAAGACCAAAGAATATATGGAGCAGACTA
AGATTGGTAGCAGGAATGTTCCTAAAGCAACCCAGAGTGACCAAAGACAAACTTCTGAAAAACAACCATT
AGACAGAGAGAGAAAAGTTATGCAGCCTGTGCTGTTCACGTCAGGGAAAGGGACTGAATCAGCGGCTACT
CAGAGGGCCAAGCTGATGGCCCGAACAGTGTCATCCACTACAAGAAAGCCAGTCACAAGAGCCACGAATG
AGAAAGGATCAGAAAGAATGAGACCAAGTGGAGGGAGACCTGCCAAAAAACCAGAAGGCAAGCCGGACAA
GGTTATTCCTTCCAAAGTTGAGCGGGACGAAAAGCATTTGGATTCGCAGACCAGGGAAACAAGTGAAATG
GGTCCGCTCGGAGTCTTCCGAGAAGTGGAAAGCTTGCCTGCAACAGCCCCTGCCCAAGGGAAGGAAAGGA
AGTCCTTTGCCCCCAAGCACTGTGTCTTCCAGCCCCCGTGTGGTCTGAAGAGCTACCAGGTGGCTCCCCT
GAGCCCTAGAAGTGCCAACGCTTTCCTGACACCCAATTGTGATTGGAACCAGTTAAGACCAGAAGTTTTT
AGCACTACAACTCAAGACAAAGCAAATGAAATCTTGGTACAGCAAGGATTGGAGTCGCTAACAGACCGTA
GTAAAGAACATGTCTTAAATCAGAAGGGTGCTTCTACTTCAGATTCAAATCACGCTTCTGTGAAAGGAGT
CCCATGCTCTGAAGCGAGCGAAGGCCAGACCTCTCAGCCCCCCCACGATGTGCCATACTTCAGAAAAATC
CTCCAATCAGAAACTGACAGGCTGACCTCGCACTGCCAGGAGTGGGAGGGGAAGCTGGACCTGGACATCC
CTGATGAAGCTAAAGGTCTTATCCGTACAACGGTTGGTCAAACAAGACTCCTTATCAAGGAGAGATTCAG
ACAGTTTGAAGGACTGGTGGACAACTGCGAGTATAAACGGGGTGAAAAGGAGACGACCTGCACAGATCTG
GATGGATTCTGGGATATGGTTAGTTTTCAGGTCGATGATGTGAACCAGAAATTCAACAACCTGATCAAAC
TTGAGGCGTCAGGATGGAAAGACAGCAATAATCCAAGCAAAAAAGTCCTCCGGAAAAAAATTGTGCCCGG
TAGAACAAGCAAAGCAAAGCAGGATGACGACGGACGAGCGGCAGCTAGGAGTCGCCTTGCAGCCATAAAG
AATGCAATGAAAGGCAGGCCACAGCAGGAAGTGCAGGCCCACGCAGCAGCTCCGGAGAACACAAAGGAAG
TTGACAAAATAGTGTTTGATGCTGGGTTTTTCAGAATCGAGAGCCCAGTGAAGTCATTCTCAGTCCTGTC
TTCTGAACGTCGTTCTCAAAGATTTGGAACACCTCTGTCTGCCAGCAAAGTTGTGCCTGAGGGCAGGGCT
GCAGGGGACCTTCTGAGACAGAAGATGCCACTGAAGAAGCCGGACCCTCAGAGCAGCAAGAGCGAGCATG
TTGATCGGACGTTTTCAGATGGTCTTGAAAGCAGGTGCCACGTAGAAGACACCCCCTGTCCTGGAGAGCA
AGATTCAAGTGACATAGAGCATGATGTAAATAAAATAAATGTCAAGATGGATTGTTTCTCTGTTGAAACG
AATTTGCCTCTTCCTGCTGGTGATGCTAATACCAATCAAAAAGAAGCAATCTCAGCTGTGGAAGGAGCGA
GCTCTGCAGTCACCTCCCAGGATTTGCTGATGAGCAACCCTGAGACAAATACCTCCTCACAGAGCAACAC
CTCACAAGAAGAAGCTGAGGCGTCGCAGTCAGTACTGTTACATAAAAGTCTCACTTCTGAATGCCACCTT
CTTGAACCACCAGGCCTCAGCTGCACCAGCCCCTGCACTCGGGAGGAGACCAGACAGCCAGATCGCAGCA
GACAGTTCTCCTTTGGAGGTGACCTCATTCTCTTCTCACCACTATGA

Translation (808 aa):
MLVSRFASRFRKDSSTEMVRTNLAHRKSLSQKENRHRVYERNRHFGLKDVNIPLEGRELGNIHETSQDLS
PEKASSKTRSVKMVLSDQRKQLLQKYKEEKQLQKLKEQREKAKRGVFKVGLYRPAAPGFLVTDQRGAKAE
PEKAFPHTGRITRSKTKEYMEQTKIGSRNVPKATQSDQRQTSEKQPLDRERKVMQPVLFTSGKGTESAAT
QRAKLMARTVSSTTRKPVTRATNEKGSERMRPSGGRPAKKPEGKPDKVIPSKVERDEKHLDSQTRETSEM
GPLGVFREVESLPATAPAQGKERKSFAPKHCVFQPPCGLKSYQVAPLSPRSANAFLTPNCDWNQLRPEVF
STTTQDKANEILVQQGLESLTDRSKEHVLNQKGASTSDSNHASVKGVPCSEASEGQTSQPPHDVPYFRKI
LQSETDRLTSHCQEWEGKLDLDIPDEAKGLIRTTVGQTRLLIKERFRQFEGLVDNCEYKRGEKETTCTDL
DGFWDMVSFQVDDVNQKFNNLIKLEASGWKDSNNPSKKVLRKKIVPGRTSKAKQDDDGRAAARSRLAAIK
NAMKGRPQQEVQAHAAAPENTKEVDKIVFDAGFFRIESPVKSFSVLSSERRSQRFGTPLSASKVVPEGRA
AGDLLRQKMPLKKPDPQSSKSEHVDRTFSDGLESRCHVEDTPCPGEQDSSDIEHDVNKINVKMDCFSVET
NLPLPAGDANTNQKEAISAVEGASSAVTSQDLLMSNPETNTSSQSNTSQEEAEASQSVLLHKSLTSECHL
LEPPGLSCTSPCTREETRQPDRSRQFSFGGDLILFSPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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