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Report for CCDS27293.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27293.1 Public Mus musculus 14 Fam216b 23 108 98 CCDS HistoryNCBI Gene:219170Re-query CCDS DB by CCDS ID:27293.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27293.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066437.4 ENSMUSP00000064524.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066437.4Link to Ensembl Protein Viewer:ENSMUSP00000064524.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000066437Re-query CCDS DB by Protein ID:ENSMUSP00000064524
Original member Current member NCBI NM_177629.4 NP_808297.1 Accepted alive Link to Nucleotide Sequence:NM_177629.4Link to Protein Sequence:NP_808297.1Re-query CCDS DB by Nucleotide ID:NM_177629Re-query CCDS DB by Protein ID:NP_808297Link to BLAST:NP_808297.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808297.1 138 Q8CC14 138 100% 0 0

Chromosomal Locations for CCDS 27293.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 78082745 78082956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78085058 78085178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78086652 78086735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (417 nt):
ATGTGGAAAGACTTGCCCCAGAATGTTCCGCGAATACCTCGAATTCAAGTCCCAGCAGCGGCTGCTGACA
ATTCATTACTGAAGGACCTAAATCAAGGGCAGAGGTGCTACTTGTACAGCATCATGAGGATTTATGACTC
CAGGCCCCAGTGGAAGGCCCTGCAGACCCGCTACATTCACAGCCTTGGGTACCAACAGCATCTGGGTTAC
ATCACTCAACAGGAGGCCTTGTCTTGTGCTGCTGTGCTTAGACATTCAACCATGCGAGCCTCAGCCACGG
TTGCTCCTCAAAGGACTATTCTCCCCAGAGTCTTCAGCCATGCAAAGAAGGGTCAACCAGCAAAACCTGG
GTTTAGAGTCGGATCCAGAGCCTCCCTGCACAGCATGCTGAGCACCAAGACCTTAGACAAGGCATAG

Translation (138 aa):
MWKDLPQNVPRIPRIQVPAAAADNSLLKDLNQGQRCYLYSIMRIYDSRPQWKALQTRYIHSLGYQQHLGY
ITQQEALSCAAVLRHSTMRASATVAPQRTILPRVFSHAKKGQPAKPGFRVGSRASLHSMLSTKTLDKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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